Human Immunodeficiency Virus Research Projects
This section provides information on our laboratory's current HIV research
interests, objectives and results.
Click on the images to the right of the captions to view or download the PDF
or image file.
MX-HIV-0086 Contig Assembly
PDf file of sequencing reaction assembly into forward and reverse
sequence consensus for the four subgenomic fragments (Prot, RTa,
RTb and Int) of the Pol region and subsequent contig assembly of
these four fragments.
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MX-HIV-0327 Contig Assembly
PDf file of sequencing reaction assembly into forward and reverse
sequence consensus for the four subgenomic fragments (Prot, RTa,
RTb and Int) of the Pol region and subsequent contig assembly of
these four fragments.
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MX-HIV-0395 Contig Assembly
PDf file of sequencing reaction assembly into forward and reverse
sequence consensus for the four subgenomic fragments (Prot, RTa,
RTb and Int) of the Pol region and subsequent contig assembly of
these four fragments.
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MX-HIV-0401 Contig Assembly
PDf file of sequencing reaction assembly into forward and reverse
sequence consensus for the four subgenomic fragments (Prot, RTa,
RTb and Int) of the Pol region and subsequent contig assembly of
these four fragments.
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MX-HIV-0422 Contig Assembly
PDf file of sequencing reaction assembly into forward and reverse
sequence consensus for the four subgenomic fragments (Prot, RTa,
RTb and Int) of the Pol region and subsequent contig assembly of
these four fragments.
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HIV Pol region fastas
Nucleotide sequences in fasta format for five Human Immunodeficiency
Virus type-1 clinical isolates. Includes highlighted regions indicating
the nucleotide sequence corresponding to the protease, reverse transcriptase
and integrase enzymes.
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HIV type 1 nucleotide sequence alignments (5 clinial
isolates)
Human Immunodeficiency Virus Type 1 nucleotide sequence unanimity
alignments, Complete Pol Region. Includes highlighted regions indicating
the nucleotide sequence corresponding to the protease, reverse transcriptase
and integrase enzymes. Derived from five clinical isolates recovered
from San Luis Potosí, México.
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HIV type 1 protease aminoacid sequence alignments
Human Immunodeficiency Virus Type 1 Protease (p15) aminoacid sequence
unanimity alignments for five clinical isolates recovered from San
Luis Potosí, México.
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HIV type 1 reverse transcriptase aminoacid sequence
alignments
Human Immunodeficiency Virus Type 1 Reverse Transcriptase (p66 &
p51) aminoacid sequence unanimity alignments for five clinical isolates
recovered from San Luis Potosí, México.
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HIV type 1 integrase aminoacid sequence alignments
Human Immunodeficiency Virus Type 1 Integrase (p32) aminoacid sequence
unanimity alignments for five clinical isolates recovered from San
Luis Potosí, México.
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